BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B12SP1|AL428861
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1155 1451 0.0
>3x_Contig1155
Length = 6106
Score = 1451 bits (732), Expect = 0.0
Identities = 732/732 (100%)
Strand = Plus / Plus
Query: 163 tttcaaatgaagaaattgttttagaaattaatgaccactcgaagctcacgaattccaaca 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tttcaaatgaagaaattgttttagaaattaatgaccactcgaagctcacgaattccaaca 66
Query: 223 gttcttcaatgaatgggttacaaattctcagtagcgtttctcaagttgcagctgaaaaca 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gttcttcaatgaatgggttacaaattctcagtagcgtttctcaagttgcagctgaaaaca 126
Query: 283 ccgcatcttctccttcttgcatcaccgctttggacaacattattagcagaattgcttcac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ccgcatcttctccttcttgcatcaccgctttggacaacattattagcagaattgcttcac 186
Query: 343 caatcagttccataaagaaggaagagtcttcatcgcttccacccctgttgcatcctccat 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 caatcagttccataaagaaggaagagtcttcatcgcttccacccctgttgcatcctccat 246
Query: 403 caataccaaacaaacacggcaaaaattttgttaatggattacctcaaccggtattccaac 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 caataccaaacaaacacggcaaaaattttgttaatggattacctcaaccggtattccaac 306
Query: 463 cattattatagagttacatagacgaaaatgcgtatacaaatattaaaaaaaattataaaa 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cattattatagagttacatagacgaaaatgcgtatacaaatattaaaaaaaattataaaa 366
Query: 523 ttattaaactgagtccgttgtacgcatctctcaatcaatcataaacgctgaaagtggaga 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttattaaactgagtccgttgtacgcatctctcaatcaatcataaacgctgaaagtggaga 426
Query: 583 atgcggttttgaatgtaattggtaaacgtcattcattcatcctaggaattgccattgaaa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atgcggttttgaatgtaattggtaaacgtcattcattcatcctaggaattgccattgaaa 486
Query: 643 tttagaaatggcggaaaacactaggataagtattattgaagtgaatttgtgggtatcatt 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttagaaatggcggaaaacactaggataagtattattgaagtgaatttgtgggtatcatt 546
Query: 703 gggagtagtacaagaataaaatgcaattaattacttgtgctgcaggatggatatctcagt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gggagtagtacaagaataaaatgcaattaattacttgtgctgcaggatggatatctcagt 606
Query: 763 aggtttcaaaaaagaggacaacagaagagggagggtcaaatgcaggctcacatgtgagga 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aggtttcaaaaaagaggacaacagaagagggagggtcaaatgcaggctcacatgtgagga 666
Query: 823 aaccagttgatgggaaaagtcagaaggaatggaaaagctgataaaaaaaaagcttaatta 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aaccagttgatgggaaaagtcagaaggaatggaaaagctgataaaaaaaaagcttaatta 726
Query: 883 ggctcgatactt 894
||||||||||||
Sbjct: 727 ggctcgatactt 738
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8756
Number of Sequences: 1807
Number of extensions: 8756
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)